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Old December 6th, 2007, 11:58 PM
Laidback Al Laidback Al is offline
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Default Commentary - Earth monitoring: Vigilance is not enough

Commentary
Nature 450, 791-792 (6 December 2007) | doi:10.1038/450791a; Published online 5 December 2007

Earth monitoring: Vigilance is not enough
by Walter Boyce

Walter Boyce is director of the Wildlife Health Center, and co-director of the NIH Center for Rapid Influenza Surveillance and Research, at the School of Veterinary Medicine, University of California, Davis, California, USA

Global surveillance is key to tracking potential pandemic viruses such as H5N1. But we need to share samples more rapidly, increase testing in endemic areas and track more than one virus, argues Walter Boyce.

Another influenza pandemic seems inevitable, and without a generic vaccine, our best chance of being prepared is to identify, track and stop the spread of viruses such as highly pathogenic H5N1. Two years ago, some believed that H5N1 viruses were poised to spread around the globe on the wings of migrating wild birds. A massive effort was mounted to track their movement but, as of September 2007, very few positive birds have been found in tests of over 300,000 healthy wild birds from more than 40 countries. Several hundred infected birds (almost all of them dead) were found in endemic and outlying areas, but dead birds do not tell us about the birds that don't get sick when infected — those that could spread H5N1 over longer distances.

We shouldn't be surprised that random sampling failed to detect what is apparently a rare event: active H5N1 infection in migrating, healthy wild birds. And failing to find H5N1 can be good news if the goal is early detection in non-endemic areas, as it was for many of the wild birds sampled in Europe and the United States.

But it is troubling that we still don't understand the importance of wild birds in the replication and spread of H5N1 within and between countries and continents. Each new virus outbreak, such as that in free-range poultry in the United Kingdom last month, is followed by uncertainty and speculation about the source and transmission route: is it wild birds or poultry? Knowing the source won't change the immediate response — new outbreaks, like fires, must be stamped out — but it will guide efforts aimed at preventing further outbreaks. For example, moving free-range poultry indoors to separate them from wild birds makes sense if wild birds are a risk. But keeping poultry indoors won't prevent an outbreak if the transfer of infected poultry is responsible.

There is growing recognition that it is time to change our surveillance approach to H5N1 and the other influenza subtypes that could cause the next pandemic. Here are three steps that can move us forward.

First, we must improve our ability and willingness to rapidly share data and samples. Despite calls for a more open approach by researchers such as Ilaria Capua at the National Reference Laboratory for Avian Influenza and Newcastle Disease in Padova, Italy, there are still substantial obstacles to the rapid sharing of data and samples, whether they are from wild birds or poultry. Regulatory problems hinder shipping of these samples between countries — it can take weeks to months to arrange for the proper import/export permits, and some countries do not allow any samples to be analysed outside their borders. It is also difficult to balance rapid public release of data with appropriate protection of intellectual-property rights.

But attitudes are changing, as shown by the creation of the Global Initiative on Sharing Avian Influenza Data (GISAID), an organization designed to unite researchers and promote data sharing. In 2005, the World Organisation for Animal Health (OIE) and the Food and Agriculture Organization (FAO) created the OFFLU avian influenza network to facilitate the collection and exchange of viruses and the deposition of sequences in genome banks. And in the United States, the National Institute of Allergy and Infectious Diseases (NIAID) has an established policy of releasing influenza genome data to GenBank and other public sites within 45 days of being generated.

On the wild-bird front, the US Agency for International Development and the Centers for Disease Control and Prevention have entered into a unique public–private partnership with the Wildlife Conservation Society, a nongovernmental organization now charged with managing the Global Avian Influenza Network for Surveillance (GAINS). This initiative aims to establish a global collaborative network for sharing data, including all influenza subtype samples, through an open-access database available to anyone.

Swapping data
Although these and other approaches and policies are important, it is ultimately up to the researchers on the front lines to ensure that data and samples make it into the pipeline as quickly as possible. Because isolating viruses is such hard work and because the resulting samples can yield a wealth of information and publications over time, there may be a tendency to view viruses in the freezer as money in the bank — a rich resource to be guarded and tapped later. This approach does not enhance pandemic preparedness, and future publications won't seem so important in the middle of a roaring pandemic. We simply must do a better job, and making data release within 45 days a community standard would be a step in the right direction.

Second, we must unravel the role of wild-bird species in spreading H5N1 by improving our wild-bird surveillance and research efforts. It is clear that wild aquatic birds are a natural reservoir of influenza viruses, although it is possible that H5N1 persists in a wild-bird species we wouldn't normally suspect. But we don't know whether H5N1 viruses are endemic in wild-bird populations or if infections in wild birds represent spillover from poultry. And although movement of infected poultry plays a pivotal part in spreading H5N1 to new areas, we continue to debate, year after year, the risk to poultry posed by migrating wild birds.

To move beyond debate and come up with definitive answers, we must investigate H5N1 in the areas where virus transmission actually takes place. Until recently, most wild birds tested for H5N1 had been sampled in regions of Europe and North America where infections are rare or absent. Dead birds, such as swans, have been conspicuous sentinels of H5N1 infection in Europe, triggering rapid responses to prevent the spread to poultry. But we don't know how these birds acquired their infections, and the presence of infected dead birds doesn't necessarily mean that virus transmission is occurring, or will occur, in the area where they are found.

A live problem
It is live birds, not dead birds, that shed the virus and pose a threat. Because our surveillance efforts have struggled to find infected live birds in non-endemic regions, it is essential that we shift sufficient resources and efforts to evaluate H5N1 transmission in wild birds in known endemic areas such as southeastern Asia, China, Indonesia and Africa.

This is not a trivial task, but encouraging signs are emerging. For example, the FAO in collaboration with national veterinary services and wildlife institutions launched a wild-bird surveillance programme in 2006 in Eastern Europe, the Middle East and Africa. And the GAINS programme, involving dozens of governmental, non-governmental, as well as academic partners, is now working in almost 30 countries, including Cambodia, Mongolia, Vietnam and Indonesia.

Early detection programmes in non-endemic regions are valuable and must continue alongside efforts in endemic areas. But when the data are mostly negative, it is no simple matter to develop a systematic, science-based programme. Risk assessments, such as those performed in the United Kingdom by the Department for Environment, Food and Rural Affairs, help improve surveillance efforts because they specifically consider the ecology and movements of high-risk bird species relative to known outbreaks of H5N1. These assessments, and the value of wild-bird surveillance in general, could be markedly improved by sampling birds at the beginning and end of their migratory journeys from endemic areas.

Third, we need to improve our ability to diagnose and characterize all virus subtypes from wild birds. H5N1 viruses are not the only pandemic threat, and this provides a compelling reason to identify and track the movement of other influenza viruses as well. We need vaccines that protect us against all of the influenza subtypes that nature might throw in our direction. The global human population is immunologically naive to at least 12 viral subtypes in addition to H5, and we don't know which virus will cause the next pandemic, or the one after that. Besides H5, today's 'short list' should include H2, H6, H7 and H9. We must look beyond H5N1 and conduct surveillance that captures the full list of viral genetic diversity — and feed those data into the development of effective pandemic vaccines.

We don't have to look far. Depending on species, location and season, up to 25% of the wild birds sampled in the past two years were infected with non-H5N1 influenza viruses. The early detection efforts in North America and Europe may have failed to find H5N1, but they did an excellent job of sampling other influenza viruses. Unfortunately, too many of these viruses were discarded and their information lost forever once samples were classified as non-H5N1. This is not good enough. We must evaluate the pandemic potential of all the influenza subtypes detected during surveillance.

It won't be easy or inexpensive. The OIE has only seven dedicated laboratories worldwide that diagnose H5N1 and other avian influenza viruses, with additional testing done in some national and private laboratories. Unfortunately, our ability to detect and identify the full range of viruses is limited because the diagnostic reagents and procedures used today were primarily optimized for identifying influenza viruses in poultry, not wild birds.

For example, virus isolation is the only available method that allows complete characterization and genetic sequencing. This procedure, typically done by inoculating wild-bird virus samples into chicken eggs, is time-consuming, expensive, requires special biosafety considerations and, importantly, might not work at all with some wild-bird viruses. Several laboratories are working on this problem, but resources are limited, and there is still an urgent need to develop and validate diagnostic tests specifically for wild birds.

The inconvenient truth is that our close relationship with domestic animals and wildlife puts us at increasing risk of an influenza pandemic, and, short of developing a vaccine, our best option is surveillance. The immediate pandemic threat being tossed our way is H5N1, but other viruses are lurking, and we had simply better be looking in the right direction, and working together, if we hope to catch the flu before it catches us.

You can comment on this article at the Nature Reports Avian Flu blog

References
http://www.fao.org/docs/eims/upload/...e_aug07_ai.pdf

http://www.gains.org/

Gaidet, N. et al. J. Wildlife Dis. 43, S22–S28 (2007).

http://www.defra.gov.uk/animalh/dise...ents120707.pdf

link: http://www.nature.com/nature/journal...l/450791a.html

Hat-tip to AlaskaDenise
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  #2  
Old December 18th, 2007, 08:30 AM
HenryN HenryN is offline
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Default Re: Commentary - Earth monitoring: Vigilance is not enough

AVIAN INFLUENZA, POULTRY VS MIGRATORY BIRDS (39): RESEARCH
************************************************** ********
A ProMED-mail post
<http://www.promedmail.org>
ProMED-mail is a program of the
International Society for Infectious Diseases
<http://www.isid.org>

Date: 11 Dec 2007
Source: Sciencedaily.com [edited]
<http://www.sciencedaily.com/releases/2007/12/071207091915.htm>


Bird-flu Expert Calls For Changes In Early-warning System
----------------------------------------------------------
The international science community is not doing enough to track the
many avian influenza viruses that might cause the next pandemic, a UC
Davis researcher says. Global surveillance is critical for
identifying and tracking potential pandemic viruses such as highly
pathogenic H5N1. But the current surveillance strategy in wild birds
is piecemeal and risks missing important virus sources or subtypes,
Walter Boyce writes in a commentary.*

Boyce says scientists must take several steps to catch avian
influenza viruses before they catch us:

-- Go where the H5N1 virus lives: Surveillance has focused too
heavily on Europe and North America, where few wild birds are
infected. To really understand the role of wild birds in spreading
H5N1, more surveillance should be done in places where the virus is
endemic, such as China, southeast Asia and Africa, Boyce says.

-- Characterize all of the influenza viruses they collect:
Currently, the narrow focus on H5N1 misses other viruses that also
pose pandemic risks.

-- Share samples and data more promptly: Whether caused by
regulatory hurdles or researchers' concerns about intellectual
property rights, a reluctance to share hampers health officials'
ability to track and respond to potential pandemic viruses. Boyce
recommends that the scientific community set a standard of releasing
data no more than 45 days after it is generated.

*The full commentary is published in Nature 7 Dec 2007:
<http://www.nature.com/nature/journal/v450/n7171/full/450791a.html>

Boyce, a UC Davis professor of veterinary medicine, is co-director of
the USD 18.5 million Center for Rapid Influenza Surveillance and
Research (CRISAR). The center, supported by the National Institutes
of Health, is charged with tracking viruses in wild birds in the
United States and Asia. Adapted from materials provided by University
of California-Davis.

--
Communicated by:
ProMED-mail Rapporteur Mary Marshall

[The original paper is worth reading in full. As an epidemiologist I
was struck by three paragraphs:

*** "... we must unravel the role of
wild-bird species in spreading H5N1 by improving our wild-bird
surveillance and research efforts. It is clear that wild aquatic
birds are a natural reservoir of influenza viruses, although it is
possible that H5N1 persists in a wild-bird species we wouldn't
normally suspect. But we don't know whether H5N1 viruses are endemic
in wild-bird populations or if infections in wild birds represent
spillover from poultry. And although movement of infected poultry
plays a pivotal part in spreading H5N1 to new areas, we continue to
debate, year after year, the risk to poultry posed by migrating wild
birds.

*** "To move beyond debate and come up with definitive answers, we
must investigate H5N1 in the areas where virus transmission actually
takes place. Until recently, most wild birds tested for H5N1 had been
sampled in regions of Europe and North America where infections are
rare or absent. Dead birds, such as swans, have been conspicuous
sentinels of H5N1 infection in Europe, triggering rapid responses to
prevent the spread to poultry. But we don't know how these birds
acquired their infections, and the presence of infected dead birds
doesn't necessarily mean that virus transmission is occurring, or
will occur, in the area where they are found.

*** "It is live birds, not dead birds, that shed the virus and pose a
threat. Because our surveillance efforts have struggled to find
infected live birds in non-endemic regions, it is essential that we
shift sufficient resources and efforts to evaluate H5N1 transmission
in wild birds in known endemic areas such as southeastern Asia,
China, Indonesia and Africa."

I am reminded of a class given me in 1964 by my Tulane epidemiology
professor Ken Newell on the praticalities of investigating an
outbreak and deciding where to go 1st. He strongly advised going
1st to look at the outlying cases because the spread factors are
few there and probably are among the most important. In the centre of
an epidemic one is presented with a score or more of possible
explanations and no easy way of sorting them out. His advice has
helped me many times. With the insights from the outer investigations
one is better prepared when diving into the middle. However Walter
Boyce's comments are very opportune and well worth considering in
these confusing times. - Mod MHJ]

[see also:
Avian influenza, poultry vs migratory birds (38): Germany 20071211.3992
Avian influenza, poultry vs migratory birds (37): Europe 20071207.3947
Avian influenza, poultry vs migratory birds (36): Europe 20071128.3842
Avian influenza, poultry vs migratory birds (35): H7 20070902.2887
Avian influenza, poultry vs migratory Birds (32): Europe 20070818.2700
Avian influenza, poultry vs migratory birds (31): Europe 20070817.2695]
....................mm/mhj/ejp/jw
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Old December 18th, 2007, 08:32 AM
HenryN HenryN is offline
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Default Re: Commentary - Earth monitoring: Vigilance is not enough

Commentary at

http://www.recombinomics.com/News/12...Europe_ME.html
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Old December 18th, 2007, 10:02 AM
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Niko Niko is offline
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Default Re: Commentary - Earth monitoring: Vigilance is not enough

Dr. Niman, Thank you for that comprehesive summary/analysis

Quote:
Originally Posted by niman View Post
Commentary

Migration of Uva Lake H5N1 to Europe and the Middle East

Recombinomics Commentary
December 18, 2007

Quote:
"It is live birds, not dead birds, that shed the virus and pose a threat. Because our surveillance efforts have struggled to find infected live birds in non-endemic regions, it is essential that we shift sufficient resources and efforts to evaluate H5N1 transmission in wild birds in known endemic areas such as southeastern Asia, China, Indonesia and Africa."

I am reminded of a class given me in 1964 by my Tulane epidemiology professor Ken Newell on the praticalities of investigating an outbreak and deciding where to go 1st. He strongly advised going 1st to look at the outlying cases because the spread factors are few there and probably are among the most important. In the centre of an epidemic one is presented with a score or more of possible explanations and no easy way of sorting them out. His advice has helped me many times. With the insights from the outer investigations one is better prepared when diving into the middle. However Walter Boyce's comments are very opportune and well worth considering in these confusing times. - Mod MHJ]
The above comments, from the most recent "Avian Influenza: Poultry vs Migratory Birds" Promed report is curious, because the suggestion for looking at outlying cases was done in the summer of 2005. The results were unequivocal, yet it was after the results were in, that Promed began a series of articles related to “dead birds don’t fly” and “wild birds as victims” and each time hard data was presented to further support the obvious involvement of wild birds in the transport and transmission of H5N1, a series of hand waving arguments using negative data would follow, and this pattern has continued for well over two year, including comments the recent H5N1 outbreak in England.

The strongest hand waving began shortly after H5N1 was confirmed at Qinghai Lake in central China in May, 2005. That outbreak began with 178 dead bar-headed geese in early May, By the time China filed its OIE report a couple of weeks later, the number of dead birds reported had grown to 519. Although most of the dead birds were bar-headed geese, other geese, gulls, and cormorants were included. Qinghai Lake is the largest lake in China and many species arrive there in the spring, so the finding of H5N1 in multiple species raised concerns that long range migratory birds could spread H5N1 far and wide. Bar-headed geese can fly 1000 miles in 24 hours and Qinghai Lake is located at the intersection of multiple major flyways.

However, the “dead birds don’t fly” argument, held that the lethality of the H5N1 would cause it to die off at Qinghai Lake and the virus would not spread. The H5N1 at Qinghai Lake was novel (Clade 2,2) and in pathogenicity studies, it killed experimental chickens within 24 hours. Similarly, experimental mice were killed within 3 days, which was likely linked to the fact that all isolates had PB2 E627K, which was a mammalian polymorphism that allowed the virus to replicate more efficiently at lower temperatures and was linked to increased virulence in mammals. Similarly, H5N1 infections usually did not cause death in waterfowl, and the positives were dead waterfowl. Moreover, at that time the “Asian” strain of H5N1 had not been reported in any country west of China, including Mongolia and southern Siberia where many flyways intersect and long range migratory birds summer. However, although the number of dead birds ranged from 5,000 to as high as 10,000 and most were bar headed geese, many birds and species clearly survived the outbreak.

In July the “dead birds don’t fly” argument was destroyed when Russia reported H5N1 on farms surround Chany Lake in southern Siberia followed by H5N1 outbreaks across the border in Kazakhstan. Sequencing of the H5N1 showed that it was the Qinghai strain and the distance from Qinghai Lake voided the “dead birds don’t fly” explanation. The pattern of infection surrounding the lake clearly pointed toward the wild birds as the source of the infection but the corollary of “wild birds as victims” was invoked, arguing that the wild birds had been infected by the poultry.

The basis of this argument primarily rested on prior observations that both H5 and H7 infections can begin as low path infections on poultry farms, and then evolve into high path by acquiring a poly-basic cleavage site via non-homologous recombination, which might be facilitated by the dense concentration of susceptible hosts at poultry farms. However, in the case of “Asian” H5N1, this was not the case because the polybasic cleavage site was identified in Guangdong province in 1996, and the cleavage site was fixed in wild birds, domestic poultry, and infected mammals, including humans. The cleavage site of the Qinghai strain was a polybasic minor variations on the theme and similar cleavage sites were found in various H5N1 “Asian” sub-clades (1, 2.1, 2.2, 2.3).

“Dead birds don’t fly” and “wild birds as victims” were simultaneously destroyed by the isolation of H5N1 from a healthy crested grebe at Chany Lake. The sequence was clearly the Qinghai strain and it was virtually indistinguishable from H5N1 in the domestic poultry or dead wild birds. Thus, the Qinghai strain required no modifications by domestic poultry and could be isolated from healthy wild birds.

However, the beginning of the negative data campaign began at Erhel Lake in Mongolia, also in August of 2005. Wild birds had begun dying there also. Since Erhel lake is remote and far from any poultry farms, identification of Qinghai H5N1 would settle any remaining issues on the transport and transmission of H5N1 by migratory birds. However, this investigation was aided by a wildlife conservation groups, and comments to the media and press releases set the tone for the upcoming campaign.

Initially, the dead wild birds were acknowledged, but the role of H5N1 was discounted because there were not enough dead birds. When H5 was found in a bar headed goose and whooper swans, H5N1 was again discounted because not enough birds were dead. When high path H5N1 was identified in these birds, it was discounted because H5N1 was not detected in the live birds at the lake.

The failure to find H5N1 in live birds at a remote lake, when H5N1 was found in dead wild birds, clearly demonstrated that the live bird assay was fatally flawed. Live birds carried the Qinghai strain to the remote lake, and domestic poultry was not required to modify the genetic information to convert low path to high path. Like Russia and Kazakhstan, Mongolia had also never reported “Asian” H5N1, so all three countries represented outliers, with new introductions of H5N1 into wild bird populations. Thus, the suggestion in the Promed commentary was met, and there was little doubt on the science side that H5N1 had moved into the long range migratory birds population at the intersection of major flyways, which would lead to the spread of H5N1 into Europe, the Middle East, and Africa.

This prediction was strengthened by further data from Russia in the summer of 2005 (the Mission report). Testing of hunter killer healthy wild birds identified H5N1 in over 25 species. Thus, as expected, infection was not limited to a small number of species and transport did not require movement by a single bird or a single species. The large number of birds and species would facilitate the spread and the predictions came to fruition in the fall of 2005.

H5N1 was first reported in the Volga Delta, signaling movement south as wild birds began to migrate out of Siberia and Mongolia. Like the earlier outbreaks, the “Asian” strain of H5N1 had never been reported west of China. Sequence analysis characterized the H5N1 from mute swans as the Qinghai strain. That was followed by more wild bird positives in Romania in the Danube Delta and in Ukraine on the Crimea Peninsula. In each instance, the H5N1 was the Qinghai strain.

However, one of the most important discoveries was H5N1 in a healthy teal in the Nile Delta in December, 2005. The H5 was discovered in a PCR test, but the researchers at NAMRU-3 couldn’t get the virus to grow. Consequently, they had to run multiple extractions to get enough RNA for a sequence. The HA and NA sequences were clearly the Qinghai strain and were subsequently shown to be virtually identical to H5N1 isolates in Austria in 2006. Thus, in December, 2005 H5N1 had already migrated into the Nile Delta, but at that time every EU country in Europe was denying the presence of H5N1, as was every country in Africa. Even Egypt did not have reported H5N1 until 2006, because of difficulties in extracting and sequencing the H5N1 from the healthy teal.

At that time, the same conservation groups that couldn’t detect H5N1 in live wild birds at Erhel Lake cited the detection failures in Europe as evidence that dead birds didn’t fly, even though H5N1 had been reported at the Volga Delta, Danube Delta, and Crimea Peninsula. However, at the beginning of 2006, H5N1 was isolated from fatal infections in Turkey, which was then followed by admissions of widespread H5N1 in Turkey in December and possibly November in both domestic and wild bird. Neighboring countries in the Middle East continued to deny H5N1 infections, but began to cull birds neighboring Turkey. In February an H5N1 cluster was confirmed in victims neighboring Iraq along with wild and domestic birds in many countries in Europe, the Middle East, and Africa. Human cases were reported in Azerbaijan, Egypt, and Djibouti. In all instances the H5N1 was the Qinghai stain.

In Europe, most countries reporting H5N1 were from wild bird infections, although the detection was exclusively in dead or dying birds, Only Russia and Egypt reported H5N1 in live healthy wild birds. Countries in Europe maintained that there was no H5N1 in EU countries in 2005, and a harsh winter in early 2006 lead to a westward migration of birds from eastern Europe. However, this explanation was not supported by the sequence data which showed the H5N1 in Austria in early 2006 matched H5N1 in the Nile Delta in 2005. Similarly much of the H5N1 in EU countries in early 2006 did nit match the regional markers in eastern Europe, Although all were the Qinghai strain, the sub-clade sequences supported independent introductions by wild birds throughout Europe, the Middle East, and Africa. In each of these areas, H5N1 was detected in wild birds, but in dead wild birds.

The detection failures in live wild birds led to further “dead birds don’t fly” and “wild birds as victim” campaigns. The conservation groups tested 10’s or 100.’s of thousands live birds with assays that had been fatally flawed in Mongolia to generate negative data for Europe, the Middle East, Africa, and North America, even in areas where H5N1 is found in dead or dying wild birds.

Surveillance shortfalls also became clear in the 2006 / 2007 season. In the summer of 2006 there was a massive die off of wild birds at Uva Lake, the largest lake in Mongolia. The die-off was on a par with Qinghai Lake, a year earlier. The H5N1 at Uva Lake was the Qinghai strain, but it was an easily distinguishable sub-clade. However, in the fall of 2006 and beginning of 2007 no country in Europe reported detecting the Uva Lake strain. The winter in 2006 /2007 was milder in Europe and reported infections were markedly lowered. At the Options VI influenza conference in Toronto, in June, 2007, H5N1 in wild birds in Europe was said to be virtually eliminated. The large numbers of negative live birds was cited as evidence that wild birds were not a major threat, and H5N1 spread was due to trade and illegal smuggling.

However, within hours of the talks by researchers in Italy and England, H5N1 was reported at a poultry farm in the Czech Republic. That report was quickly followed by H5N1 detection in wild birds in the Czech Republic and neighboring Germany. The outbreaks in Germany were widespread and included Bavaria, Saxony, Saxony Anhalt, and Thuringia. Over 300 wild birds were H5N1 confirmed, approaching levels detected in early 2006, when Germany reported the highest number of H5N1 confirmed wild birds in Europe. Once again H5N1 was widespread in Europe, but the detection was in the middle of the summer, when long range migration was minimal, indicting H5N1 had become endemic in wild birds in Germany, even though there were virtually no reports of H5N1 between the summer of 2006 and summer of 2007. Moreover, the H5N1 detected in Germany was the “missing” Uva Lake strain. Prior to the summer of 2007, the only country reporting this strain in 2007 was Kuwait.

However, in September 2007 the sequence of H5N1 from a chicken outbreak in Krasnodar was published, and it was clearly Uva Lake, as were sequences from three regions in Germany. A wild bird (whooper swan) sequence from Krasnodar was also published and the HA sequence was an exact match of the chicken sequence and the two isolates were 99.95% identical. The Krasnodar isolates were also Uva Lake but like the sequences from three regions in Germany, represented independent introductions that had identities above 99%, but well, shy of the greater than 99.9% identity seen when the isolates were from a common source.

Reports also indicate that the outbreaks over the summer in the Czech Republic and France were the Uva Lake strain as was the more recent outbreak in England. The outbreak in England involved free range turkeys, and the Royal Bird Watchers in England were again citing negative data generated by the dismal surveillance program in England, which not only failed to find H5N1 in live birds, but has only found H5N1 in one dead swan on the shores of Scotland, although H5N1 has been repeatedly detected in dead wild birds in Germany, Denmark, Sweden, and France/ Also cited were detection failures in western Europe between the summer of 2007 and the outbreak in England as evidence that the Uva Lake strain was due to an unreported domestic poultry reservoir somewhere in Europe. The argument by the bird watchers ignored the outbreak in Krasnodar in September and the more recent outbreaks in the Danube Delta in Romania and multiple locations on northern Poland, which included H5N1 in wild birds. Moreover, the most recent outbreak reported in Europe is in northeastern Germany, adjacent to Poland, and as indicated yesterday, the German outbreak is due to the Uva Lake strain.

Thus, the Uva Lake strain in the fall of 2006, like the Qinghai Lake strain in the fall of 2005, went undetected in western Europe, again raising serious surveillance questions relative to dead wild birds. Moreover, the detection failures in live wild birds highlights a fatally flawed program that uses methods and assays which lack sensitivi6y to detect H5N1 in live wild birds.

These flaws extend worldwide, especially to countries in Europe, the Middle East, and Africa which fail to find H5N1 in wild birds prior to outbreaks in domestic poultry. These countries include Saudi Arabia, where over 4 million birds have been culled just before the start of the Hajj, and Pakistan where a large human cluster will be confirmed today, with an obvious human-to-human transmission pattern.

The surveillance failures remain hazardous to the world's health.
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The information collated here is for instructional and/or discussion purposes only and is NOT intended to diagnose or treat any disease, illness, or other medical condition. Every individual reader or poster should seek advice from their personal physician/healthcare practitioner before considering or using any interventions that are discussed on this website.

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