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LOCUS EU424135 1707 bp cRNA linear VRL 16-FEB-2008
DEFINITION Influenza A virus (A/houbara bustard/Saudi
Arabia/6732-1/2007(H5N1)) hemagglutinin (HA) gene, complete cds.
ACCESSION EU424135
VERSION EU424135.1 GI:167613752
KEYWORDS .
SOURCE Influenza A virus (A/houbara bustard/Saudi
Arabia/6732-1/2007(H5N1))
ORGANISM Influenza A virus (A/houbara bustard/Saudi
Arabia/6732-1/2007(H5N1))
Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
Influenzavirus A.
REFERENCE 1 (bases 1 to 1707)
AUTHORS Fusaro,A., Monne,I., Cattoli,G., Salviato,A., Capua,I., Ismail,M.M.
and Al Essa,A.
TITLE Co-circulation of two sublineages of HPAI H5N1 in the Kingdom of
Saudi Arabia
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1707)
AUTHORS Fusaro,A., Monne,I., Cattoli,G., Salviato,A., Capua,I., Ismail,M.M.
and Al Essa,A.
TITLE Direct Submission
JOURNAL Submitted (24-JAN-2008) Research & Development Department, Istituto
Zooprofilattico Sperimentale delle Venezie, OIE/FAO and National
Reference Laboratory for Newcastle Disease and Avian Influenza, OIE
Collaborating Centre for Epidemiology, Training and Control of
Emerging Avian Diseases, Viale dell'Universita' 10, Legnaro, Padova
35020, Italy
FEATURES Location/Qualifiers
source 1..1707
/organism="Influenza A virus (A/houbara bustard/Saudi
Arabia/6732-1/2007(H5N1))"
/mol_type="viral cRNA"
/strain="A/houbara bustard/Saudi Arabia/6732-1/2007"
/serotype="H5N1"
/db_xref="taxon:502079"
gene 1..1707
/gene="HA"
CDS 1..1707
/gene="HA"
/codon_start=1
/product="hemagglutinin"
/protein_id="ABZ89504.1"
/db_xref="GI:167613753"
/translation="MEKIVLLLAIINLVKSDQICIGYHANNSTEQVDTIME KNVTVTH
AQDILEKTHNGKLCDLDGVKPLILRDCSVAGWLLGNPMCDEFLNVPEWSY IVEKINPA
NDLCYPGNFNDYEELKHLLSRINHFEKIQIIPKSSWSDHEASSGVSSACP YQGRSSFF
RNVVWLIKKNDAYPTIKISYNNTNQEDLLVLWGIHHPNDAAEQTRLYQNP TTYISVGT
STLNQRLVPKIAIRSKVNGQSGRMEFFWTILKPNDAINFESNGNFIAPEN AYKIVKKG
DSTIMKSELEYGNCNTKCQTPIGAINSSMPFHNIHPLTIGECPKYVKSNR LVLATGLR
NSPQGERRRKKRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADK ESTQKAID
GVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNA ELLVLMEN
ERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHRCDNECMESVRN GTYDYPQY
SEESRLKREEISGVKLESIGTYQILSIYSTVASSLALAIMVAGLSLWMCS NGSLQCRI
CI"
ORIGIN
1 atggagaaaa tagtgcttct tcttgcaata atcaatcttg ttaaaagtga tcagatttgc
61 attggttacc atgcaaacaa ctcgacagag caggttgaca caataatgga aaagaacgtc
121 actgttacac acgcccaaga catactggaa aagacacaca acgggaagct ctgcgatcta
181 gacggagtga agcctctaat tttaagagat tgtagtgtag ctggatggct cctcgggaat
241 ccaatgtgtg acgaattcct caatgtgccg gaatggtctt acatagtgga gaagatcaat
301 ccagccaatg acctctgtta cccagggaat ttcaacgact atgaagaact gaaacaccta
361 ttgagcagaa taaaccattt tgagaaaatt cagatcatcc ccaaaagttc ttggtcagat
421 catgaagcct catcaggggt gagctcagca tgtccatacc agggaaggtc ctcctttttt
481 agaaatgtgg tatggcttat caaaaagaac gatgcatacc caacaataaa gataagttac
541 aataatacca accaagaaga tcttttggta ctgtggggga ttcaccatcc aaatgatgcg
601 gcagagcaga caaggctcta tcaaaaccca accacctata tttccgttgg gacatcaaca
661 ctaaaccaga gattggtacc aaaaatagct attagatcca aggtaaacgg gcaaagtgga
721 aggatggagt tcttttggac aattttaaaa ccgaatgatg caataaattt tgagagtaat
781 ggaaatttca ttgctccaga aaatgcatac aaaattgtca agaaagggga ctcaacaatc
841 atgaaaagtg aattggaata tggtaactgc aacaccaagt gtcaaactcc aataggggcg
901 ataaactcta gtatgccatt ccacaacatc caccctctca ccattgggga atgccccaaa
961 tatgtgaaat caaacagatt agtccttgcg actgggctca gaaatagccc tcaaggagag
1021 agaagaagaa aaaagagagg actatttgga gctatagcag gttttataga gggaggatgg
1081 cagggaatgg tagatggttg gtatgggtac caccatagta acgagcaggg gagtgggtac
1141 gctgcagaca aagaatccac tcaaaaggca atagatggag tcaccaataa ggtcaactcg
1201 atcattgaca aaatgaacac tcagtttgag gccgttggaa gggaatttaa taacttagaa
1261 aggagaatag agaatttaaa caagaagatg gaagacggat ttctagatgt ctggacttat
1321 aatgctgaac ttctggttct catggaaaat gagagaactc tagactttca tgactcaaat
1381 gttaagaacc tttacgacaa ggtccgacta cagcttaggg ataatgcaaa agagcttggt
1441 aacggttgtt tcgagttcta tcacagatgt gataatgaat gtatggaaag tgtaagaaac
1501 ggaacgtatg actacccgca gtattcagaa gaatcaagat taaaaagaga ggaaataagt
1561 ggagtaaagt tggagtcaat aggaacttat caaatactgt caatttattc aacagtggcg
1621 agctccctag cactggcaat catggtggct ggtctatctt tatggatgtg ctccaatgga
1681 tcgttacaat gcagaatttg catttaa
DEFINITION Influenza A virus (A/houbara bustard/Saudi
Arabia/6732-1/2007(H5N1)) hemagglutinin (HA) gene, complete cds.
ACCESSION EU424135
VERSION EU424135.1 GI:167613752
KEYWORDS .
SOURCE Influenza A virus (A/houbara bustard/Saudi
Arabia/6732-1/2007(H5N1))
ORGANISM Influenza A virus (A/houbara bustard/Saudi
Arabia/6732-1/2007(H5N1))
Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
Influenzavirus A.
REFERENCE 1 (bases 1 to 1707)
AUTHORS Fusaro,A., Monne,I., Cattoli,G., Salviato,A., Capua,I., Ismail,M.M.
and Al Essa,A.
TITLE Co-circulation of two sublineages of HPAI H5N1 in the Kingdom of
Saudi Arabia
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1707)
AUTHORS Fusaro,A., Monne,I., Cattoli,G., Salviato,A., Capua,I., Ismail,M.M.
and Al Essa,A.
TITLE Direct Submission
JOURNAL Submitted (24-JAN-2008) Research & Development Department, Istituto
Zooprofilattico Sperimentale delle Venezie, OIE/FAO and National
Reference Laboratory for Newcastle Disease and Avian Influenza, OIE
Collaborating Centre for Epidemiology, Training and Control of
Emerging Avian Diseases, Viale dell'Universita' 10, Legnaro, Padova
35020, Italy
FEATURES Location/Qualifiers
source 1..1707
/organism="Influenza A virus (A/houbara bustard/Saudi
Arabia/6732-1/2007(H5N1))"
/mol_type="viral cRNA"
/strain="A/houbara bustard/Saudi Arabia/6732-1/2007"
/serotype="H5N1"
/db_xref="taxon:502079"
gene 1..1707
/gene="HA"
CDS 1..1707
/gene="HA"
/codon_start=1
/product="hemagglutinin"
/protein_id="ABZ89504.1"
/db_xref="GI:167613753"
/translation="MEKIVLLLAIINLVKSDQICIGYHANNSTEQVDTIME KNVTVTH
AQDILEKTHNGKLCDLDGVKPLILRDCSVAGWLLGNPMCDEFLNVPEWSY IVEKINPA
NDLCYPGNFNDYEELKHLLSRINHFEKIQIIPKSSWSDHEASSGVSSACP YQGRSSFF
RNVVWLIKKNDAYPTIKISYNNTNQEDLLVLWGIHHPNDAAEQTRLYQNP TTYISVGT
STLNQRLVPKIAIRSKVNGQSGRMEFFWTILKPNDAINFESNGNFIAPEN AYKIVKKG
DSTIMKSELEYGNCNTKCQTPIGAINSSMPFHNIHPLTIGECPKYVKSNR LVLATGLR
NSPQGERRRKKRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADK ESTQKAID
GVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNA ELLVLMEN
ERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHRCDNECMESVRN GTYDYPQY
SEESRLKREEISGVKLESIGTYQILSIYSTVASSLALAIMVAGLSLWMCS NGSLQCRI
CI"
ORIGIN
1 atggagaaaa tagtgcttct tcttgcaata atcaatcttg ttaaaagtga tcagatttgc
61 attggttacc atgcaaacaa ctcgacagag caggttgaca caataatgga aaagaacgtc
121 actgttacac acgcccaaga catactggaa aagacacaca acgggaagct ctgcgatcta
181 gacggagtga agcctctaat tttaagagat tgtagtgtag ctggatggct cctcgggaat
241 ccaatgtgtg acgaattcct caatgtgccg gaatggtctt acatagtgga gaagatcaat
301 ccagccaatg acctctgtta cccagggaat ttcaacgact atgaagaact gaaacaccta
361 ttgagcagaa taaaccattt tgagaaaatt cagatcatcc ccaaaagttc ttggtcagat
421 catgaagcct catcaggggt gagctcagca tgtccatacc agggaaggtc ctcctttttt
481 agaaatgtgg tatggcttat caaaaagaac gatgcatacc caacaataaa gataagttac
541 aataatacca accaagaaga tcttttggta ctgtggggga ttcaccatcc aaatgatgcg
601 gcagagcaga caaggctcta tcaaaaccca accacctata tttccgttgg gacatcaaca
661 ctaaaccaga gattggtacc aaaaatagct attagatcca aggtaaacgg gcaaagtgga
721 aggatggagt tcttttggac aattttaaaa ccgaatgatg caataaattt tgagagtaat
781 ggaaatttca ttgctccaga aaatgcatac aaaattgtca agaaagggga ctcaacaatc
841 atgaaaagtg aattggaata tggtaactgc aacaccaagt gtcaaactcc aataggggcg
901 ataaactcta gtatgccatt ccacaacatc caccctctca ccattgggga atgccccaaa
961 tatgtgaaat caaacagatt agtccttgcg actgggctca gaaatagccc tcaaggagag
1021 agaagaagaa aaaagagagg actatttgga gctatagcag gttttataga gggaggatgg
1081 cagggaatgg tagatggttg gtatgggtac caccatagta acgagcaggg gagtgggtac
1141 gctgcagaca aagaatccac tcaaaaggca atagatggag tcaccaataa ggtcaactcg
1201 atcattgaca aaatgaacac tcagtttgag gccgttggaa gggaatttaa taacttagaa
1261 aggagaatag agaatttaaa caagaagatg gaagacggat ttctagatgt ctggacttat
1321 aatgctgaac ttctggttct catggaaaat gagagaactc tagactttca tgactcaaat
1381 gttaagaacc tttacgacaa ggtccgacta cagcttaggg ataatgcaaa agagcttggt
1441 aacggttgtt tcgagttcta tcacagatgt gataatgaat gtatggaaag tgtaagaaac
1501 ggaacgtatg actacccgca gtattcagaa gaatcaagat taaaaagaga ggaaataagt
1561 ggagtaaagt tggagtcaat aggaacttat caaatactgt caatttattc aacagtggcg
1621 agctccctag cactggcaat catggtggct ggtctatctt tatggatgtg ctccaatgga
1681 tcgttacaat gcagaatttg catttaa
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