tetano
Editor, Senior Moderator
Diagn Microbiol Infect Dis. 2015 Nov 6. pii: S0732-8893(15)00402-2. doi: 10.1016/j.diagmicrobio.2015.11.003. [Epub ahead of print]
[h=1]Comparison of microarray-predicted closest genomes to sequencing for poliovirus vaccine strain similarity and influenza A phylogeny.[/h] Maurer-Stroh S[SUP]1[/SUP], Lee CW[SUP]2[/SUP], Patel C[SUP]3[/SUP], Lucero M[SUP]4[/SUP], Nohynek H[SUP]5[/SUP], Sung WK[SUP]2[/SUP], Murad C[SUP]6[/SUP], Ma J[SUP]7[/SUP], Hibberd ML[SUP]2[/SUP], Wong CW[SUP]2[/SUP], Sim?es EA[SUP]8[/SUP].
[h=3]Author information[/h]
[h=3]Abstract[/h] We evaluate sequence data from the PathChip high-density hybridization array for epidemiological interpretation of detected pathogens. For influenza A, we derive similar relative outbreak clustering in phylogenetic trees from PathChip-derived compared to classical Sanger-derived sequences. For a positive polio detection, recent infection could be excluded based on vaccine strain similarity.
Copyright ? 2015 The Authors. Published by Elsevier Inc. All rights reserved.
[h=4]KEYWORDS:[/h] Diagnostics; Epidemiology; Hybridization array; Infectious disease; Influenza; PCR; Poliovirus
PMID: 26658310 [PubMed - as supplied by publisher]
[h=1]Comparison of microarray-predicted closest genomes to sequencing for poliovirus vaccine strain similarity and influenza A phylogeny.[/h] Maurer-Stroh S[SUP]1[/SUP], Lee CW[SUP]2[/SUP], Patel C[SUP]3[/SUP], Lucero M[SUP]4[/SUP], Nohynek H[SUP]5[/SUP], Sung WK[SUP]2[/SUP], Murad C[SUP]6[/SUP], Ma J[SUP]7[/SUP], Hibberd ML[SUP]2[/SUP], Wong CW[SUP]2[/SUP], Sim?es EA[SUP]8[/SUP].
[h=3]Author information[/h]
[h=3]Abstract[/h] We evaluate sequence data from the PathChip high-density hybridization array for epidemiological interpretation of detected pathogens. For influenza A, we derive similar relative outbreak clustering in phylogenetic trees from PathChip-derived compared to classical Sanger-derived sequences. For a positive polio detection, recent infection could be excluded based on vaccine strain similarity.
Copyright ? 2015 The Authors. Published by Elsevier Inc. All rights reserved.
[h=4]KEYWORDS:[/h] Diagnostics; Epidemiology; Hybridization array; Infectious disease; Influenza; PCR; Poliovirus
PMID: 26658310 [PubMed - as supplied by publisher]