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Open Forum Infect Dis . Opportunities for Enhanced Public Health Surveillance via Molecular Detection and Sequencing of Diverse Respiratory Viruses

tetano

Editor, Senior Moderator
Open Forum Infect Dis


. 2024 Aug 10;11(8):ofae447.
doi: 10.1093/ofid/ofae447. eCollection 2024 Aug. Opportunities for Enhanced Public Health Surveillance via Molecular Detection and Sequencing of Diverse Respiratory Viruses From Self-collected SARS-CoV-2 Antigen Test Swabs

Kat Schmidt[SUP] 1 2 [/SUP], Simon D Pollett[SUP] 1 2 [/SUP], Stephanie A Richard[SUP] 1 2 [/SUP], Vivian Hogan[SUP] 1 2 [/SUP], Emily Hone[SUP] 1 2 [/SUP], Jennifer Rothenberg[SUP] 1 2 [/SUP], Rezalina Tant[SUP] 1 2 [/SUP], Michele Wayman[SUP] 1 2 [/SUP], Chantele Friend[SUP] 1 2 [/SUP], Kamala Thapa[SUP] 1 2 [/SUP], Lola Ulomi[SUP] 1 2 [/SUP], Julian Davies[SUP] 1 2 [/SUP], Amber Michel[SUP] 1 2 [/SUP], Timothy H Burgess[SUP] 1 [/SUP], Robert J O'Connell[SUP] 1 [/SUP], Mark P Simons[SUP] 1 [/SUP], Drake H Tilley[SUP] 3 [/SUP], Anthony C Fries[SUP] 4 [/SUP], Rhonda E Colombo[SUP] 1 2 [/SUP]



Affiliations
Abstract

We sequenced and genotyped severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), influenza, adenovirus, and respiratory syncytial virus, among other pathogens, from residual anterior nasal swabs self-collected for rapid SARS-CoV-2 antigen testing at the US Naval Academy. This is a key proof-of-concept for an acute respiratory infection surveillance approach, which could leverage prevalent SARS-CoV-2 antigen self-testing.

Keywords: SARS-CoV-2; human influenza; public health surveillance; respiratory tract infection; whole-genome sequencing.

 
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